Journal article

High-Resolution Confocal Fluorescence Imaging of Serine Hydrolase Activity in Cryosections - Application to Glioma Brain Unveils Activity Hotspots Originating from Tumor-Associated Neutrophils

N Aaltonen, PK Singha, H Jakupović, T Wirth, H Samaranayake, S Pasonen-Seppänen, K Rilla, M Varjosalo, LE Edgington-Mitchell, P Kasperkiewicz, M Drag, S Kälvälä, E Moisio, JR Savinainen, JT Laitinen

Biological Procedures Online | BMC | Published : 2020

Abstract

Background: Serine hydrolases (SHs) are a functionally diverse family of enzymes playing pivotal roles in health and disease and have emerged as important therapeutic targets in many clinical conditions. Activity-based protein profiling (ABPP) using fluorophosphonate (FP) probes has been a powerful chemoproteomic approach in studies unveiling roles of SHs in various biological systems. ABPP utilizes cell/tissue proteomes and features the FP-warhead, linked to a fluorescent reporter for in-gel fluorescence imaging or a biotin tag for streptavidin enrichment and LC-MS/MS-based target identification. Existing ABPP approaches characterize global SH activity based on mobility in gel or MS-based t..

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University of Melbourne Researchers